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amr_pipeline

bioconda-recipes

Conda recipes for the bioconda channel.

dnaland

Selected source code for DNA.Land (https://dna.land)

earth_virome_pipeline

Pipeline for the detection and isolation of viral reads from metagenomic data

edwardslab

Code from the Edwards lab, including bioinformatics, image analysis and more. All this code is created and maintained by folks at Rob Edwards' bioinformatics lab at SDSU.

flashpca

Fast Principal Component Analysis of Large-Scale Genome-Wide Data

genographic_ancestry

gestation_multiomics

An reanalysis of Ghaemi et al (2018, Bioinformatics) using a simpler Elastic Net model and further statistical analysis to identify batch effect and outliers

manuals-and-policies

ncbi_taxonomy_tree

NCBI taxonomy tree in-memory mapping

ng

openheatmap

A web renderer for geographic heat maps, using OpenStreetMap compatible file formats

qiime2_processing

Running QIIME2/DADA2 on a set of sample

ristretto

Randomized Dimension Reduction Library

rjnmf

spraw_expenditure

Beyond Density: Municipal Expenditures and the Shape and Location of Development

statrethinking_winter2019

Statistical Rethinking course at MPI-EVA from Dec 2018 through Feb 2019

strainsifter

A straightforward bioinformatic pipeline for detecting a bacterial strain in one or more metagenome(s).

translator-bigquery-api

This is the API for the translator biqquery project

web_data_scraping