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clinical-fusion

Clinical data fusion

coronavac-ve-brazil

Code and data for the manuscript: "Impact of CoronaVac on Covid-19 outcomes of elderly adults in a large and socially unequal Brazilian city: A target trial emulation study"

covid19-review

A collaborative review of the emerging COVID-19 literature. Join the chat here:

cv

:page_facing_up: My CV/resume

cv-1

My CV built using R Markdown and the vitae package.

datacleanexample

Rationale and workflow for VUMC CIBS data cleaning process, using example REDCap database

intro-to-r-for-clinicians-rmed2020

Introduction to R for Clinicians for the R/Medicine 2020 Virtual Conference

intro_to_r_for_medical_data_rmed2021

mpss-mrgsolve

nhsrplotthedots

An SPC package to support NHSE/I 'Making Data Count' programme

nhsrtheme

R package that helps to create plots that follow the NHS Identity

r-pharma2022

The material for the R/Pharma workshop about end to end clinical trials

rootstock

Clone me to create your Manubot manuscript

rpharma2021-workshop

Materials for the safetyGraphics R Phama 2021 Workshop

rscripts

R scripts with templates and examples of analyses using knitr with Rmarkdown or LaTeX

seascape_collaboration

This repository is a framework used in the Seascape Lab for collaboration

svm-r-markdown-templates

This is my (deprecated) suite of R Markdown templates for academic manuscripts, beamer presentations, and syllabi. DOWNLOAD {stevetemplates} INSTEAD.

sydney_xaringan

University of Sydney theme for xaringan (remark.js)

table-magic

Converts between CSV, HTML and Markdown. Has a little form editor and a preview.

targettrial_thresholdsforimv

Cohort construction and analysis code for our target trial emulation of thresholds for invasive ventilation in hypoxemic respiratory failure

teach-r-online

Materials for the Teaching statistics and data science online workshops in July 2020

training-modules

Materials for short, half-day workshops

trug-ggplot2

:bar_chart: Slides for presentation on ggplot2 at Tampa R Users Meetup (Jan 2018)

tte-short-course

Material for the short course on Target Trial Emulation, 28 Nov 2022

ttecausalrdi

Code for assessing the causal effects of chemotherapy Received Dose Intensity (RDI) on survival outcomes in osteosarcoma patients using a Target Trial Emulation approach.

ub-cdse-2019

uncloak

A live theme editor for reveal.js (colors, font, sizes...)

usf-boot-camp-r

Slides and materials for R sessions at USF Code & Data Boot Camp 2014

vitalutils

Open source code for processing vital files

xaringan-basics-and-beyond

Sharing Your Work with xaringan: Workshop created for the NHS-R Community 2020 Virtual Conference.