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Chaz Reid's Projects

2019-snakemake-byok8s icon 2019-snakemake-byok8s

Build Snakemake workflows that are command line utilities that can run on a kubernetes cluster. Plus, Travis CI tests with minikube... byok8s = Bring Your Own Kubernetes

2020-workflows-paper icon 2020-workflows-paper

Strategies for leveraging workflow systems to streamline large-scale biological analyses

a-shrubbery icon a-shrubbery

This is a shrubbery! That contains Leaflets! Little tiny maps. With little tiny people. http://charlesreid1.github.io/a-shrubbery

alpine-base icon alpine-base

Alpine Linux Base contains all the boilerplate you need to create an Docker container using latest stable Alpine linux minimal system.

angus icon angus

Materials for Analyzing Next-Generation Sequencing (ANGUS) course.

applescript-droplet icon applescript-droplet

A template for creating Droplets for Mac OS X that will pass dropped files to an embedded script

archimedes-pelican icon archimedes-pelican

Combining Angular + Pelican for Python-powered webapps. http://charlesreid1.github.com/archimedes-pelican

asmodeus icon asmodeus

Procedurally generated content blogging using git and Python. (http://charlesreid1.github.io/asmodeus)

b-captain-hook icon b-captain-hook

Captain Hook is a gitea webhook server running flask-gitea-webserver. https://pages.charlesreid1.com/b-captain-hook

backstage icon backstage

Backstage is an open platform for building developer portals

binder icon binder

(PR MERGED) Binder metapackage for usage, docs, and chat

captain-hook icon captain-hook

Captain Hook is a webhook server for running scripts via webhooks from Github or Gitea. Powered by Flask. https://pages.charlesreid1.com/b-captain-hook

centillion icon centillion

main repository: https://github.com/dcppc/centillion

circe icon circe

Machine learning Jupyter notebooks. https://charlesreid1.github.io/circe

colorbomb icon colorbomb

Adventures in colors and images with Python. http://charlesreid1.github.io/colorbomb

continuous-build icon continuous-build

Show how to use continuous integration to test your dependency specifications

corpora-fork icon corpora-fork

A collection of small corpuses of interesting data for the creation of bots and similar stuff.

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