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Hi, I'm Jaime

I'm a PhD student in the Program of Biology at New York University in Prof. Mercedes Pascual's research group. My research interests are broadly infectious disease dynamics, antigenic evolution of Dengue viruses forced by the environment, eco-epidemiology of pathogenic bacteria and it's implications to human population health in relatively short time-scales. I use epidemiological models and interrogate the models with nature measurements using simulation based inference methods.

Jaime Cascante Vega's Projects

alluvial_diagram icon alluvial_diagram

A python script for generating "alluvial" styled bipartite diagrams, using matplotlib and numpy

amr_abm2 icon amr_abm2

Estimating nosocomial transmission of micro-organisms in hospital settings using patient records and culture data

amr_modeling icon amr_modeling

Mathematical models of antimicrobial resistance pathogens in hospitals

cocoapi icon cocoapi

COCO API - Dataset @ http://cocodataset.org/

coronavirus-data_nyc icon coronavirus-data_nyc

This repository contains data on Coronavirus Disease 2019 (COVID-19) in New York City (NYC), from the NYC Department of Health and Mental Hygiene.

curvefit icon curvefit

Generic curve fitting package with nonlinear mixed effects model

delphi icon delphi

DELPHI: The Epidemiological model underlying COVIDAnalytics

fairseq icon fairseq

Facebook AI Research Sequence-to-Sequence Toolkit written in Python.

id_modeling icon id_modeling

Introduction to mathematical models mostly in infectious diseases.

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