Name: Cécile Ané
Type: User
Company: University of Wisconsin - Madison
Bio: currently focused on developing
methods for studying evolution along phylogenetic networks. See JuliaPhylo: https://github.com/JuliaPhylo/
Location: Madison, WI, USA
Blog: http://www.stat.wisc.edu/~ane/
Cécile Ané's Projects
Combine ingredients for a plot
personal github website
course website: computing tools for data analytics
Task description and data for candidates applying to be a Data Analyst in the Discovery department at Wikimedia Foundation.
A documentation generator for Julia.
The official registry of general Julia packages
Hybrid-Lambda is a software package that can simulate gene trees within a rooted species network or a rooted species tree under the Kingman's coalescent or Lambda coalescent process.
Bayesian species delimitation integrating genes and traits
Detection of evolutionary shifts in Ornstein-Uhlenbeck models
This is a shell script that will clone multiple repositories. The intended usage is for GitHub Classroom to be able to clone all repos of a certain assignment. The script will create a folder based on the identifier(assignment name) then make folders for each repo then clone. Uses GitHub api v3, curl 7.49.1 and grep 2.5.1
Metadata for registered Julia packages.
A package for graphs with vertex labels and metadata in Julia
workshop on phylogenetic comparative methods on networks, July 2023
R code to draw simplex graphs
Simulation to quantify the prevalence of anomalous 4-taxon networks
Simulations of gene trees with rate variation
Basic use and test of software SNAQ! applying to the reduced genetic trees data sample.
pipeline for highly parallelized concordance analyses on very long alignments, and TICR test
research project with Sabrina
example Julia package
The official repository for the UW SGSA website:
analysis of whole genome duplications (WGD) and triplications (WGT) using comparative gene count data
SNP calling project in Zea Mays