caufieldjh Goto Github PK

arrg

Academic Responsibility and Reality Graph - a graph representation of what academic faculty and other researchers are expected to do

awesome

😎 Awesome lists about all kinds of interesting topics

awesome-bioie

🧫 A curated list of resources relevant to doing Biomedical Information Extraction (including BioNLP)

awesome-nlp

:book: A curated list of resources dedicated to Natural Language Processing (NLP)

awesome-production-machine-learning

A curated list of awesome open source libraries to deploy, monitor, version and scale your machine learning

berkeleybop.github.io

Homepages for the Berkeley BOP.

biolink-model

Schema and generated objects for biolink data model and upper ontology

bioregistry

📮 An integrative registry of biological databases, ontologies, and nomenclatures.

biosample-graph

Learning from graph representations of GOLD biosample metadata and beyond

brrr

BRRR - Biomedical Reference Range Resources

caseolap.github.io

CaseOLAP Website [Front line]. This demo website consists of general information about CaseOLAP and it's implementation as well as sample results.

caufieldjh

caufieldjh.github.io

Personal repo-focused website

complexdissect

A utility for comparing protein complex sets

corpora

A collection of small corpuses of interesting data for the creation of bots and similar stuff.

covidator

dissertation

Supplementary materials for ILS PhD dissertation.

embiggen

Embedding generator - embiggen

ensmallen_graph

Rust library to run weighted first and second order random walks on very big graphs.

flair

A very simple framework for state-of-the-art Natural Language Processing (NLP)

go-site

A collection of metadata, tools, and files associated with the Gene Ontology public web presence.

grakn

The Knowledge Graph

grape

Rust/Python for high-performance Graph Processing and Embedding.

grape_appyter

An Appyter for Ensmallen (and Embiggen)

heartcases

A medical language processing system for case reports involving cardiovascular disease.

humandiseaseontology

Repository for the Human Disease Ontology.

hydra

Livecoding networked visuals in the browser

icd-11-helpers

Scripts for working with ICD-11 data, generally the Mortality and Morbidity Statistics

icd11

ICD11 API wrapper for python3

kgcl

Datamodel for KGCL (Knowledge Graph Change Language)