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athena

Minimalist static blog generator written in Python

barcoding

Lima - Demultiplex Barcoded PacBio Samples

bforest

bioconda-recipes

Conda recipes for the bioconda channel.

bionano-docker

Docker image for BioNano Access software

bonito

A PyTorch Basecaller for Oxford Nanopore Reads

carousel

caspargross-project

caspargross.github.io

Personal Landing Page

d3visualizations

expander

Identify and characterize repeat expansions in long read data

flair

Full-Length Alternative Isoform analysis of RNA

flye

De novo assembler for single molecule sequencing reads using repeat graphs

hapdup

!FORK! container image: https://hub.docker.com/repository/docker/caspargross/hapdup

hybridassembly

Nextflow pipeline for hybrid assembly combining short read (Illumina) and long read (Nanopore) data.

landclimtools

R-Package to work with LandClim

luxpark

megsap

a Medical Genetics Sequence Analysis Pipeline

methylartist

Tools for plotting methylation data in various ways

mongotest

motifgen

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

multiqc_testdata

Test data for MultiQC. See https://github.com/ewels/MultiQC

nanomod

Extract base modification informations from Fast5 files

nanoplotter

Plotting functions of Oxford Nanopore sequencing data with adapted plotting themes.

nextflow

Fork: Runs with internal Proxy with HTTP_AUTH

nf-core-denovohybrid

See the main fork of this repository here >>

ont_sv

Structural variant predicition with Nanopore reads

plasmident

Pipeline for identification of circular plasmids from genome assemblies and resistance gene annotation

proteinview3d