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carshadi's Projects

aind-ng-link icon aind-ng-link

Python package for the generation of neuroglancer links

karateclub icon karateclub

A general purpose community detection and network embedding library for research built on NetworkX.

ome-zarr-py icon ome-zarr-py

Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

pyktx icon pyktx

Python module for using KTX format OpenGL texture image files

pystripe icon pystripe

An image processing package for removing streaks from SPIM images

sciview icon sciview

sciview is a tool for visualization and interaction with ND image and mesh data

stitching-spark icon stitching-spark

Reconstruct big images from overlapping tiled images on a Spark cluster.

tifffile icon tifffile

Read and write TIFF files. Forked from https://pypi.org/project/tifffile

tmt icon tmt

A toolbox of Matlab functions useful for data analysis, especially of electrophysiology data.

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