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aberrant-expression-pipeline

absplice-vep

The VEP plugin for AbSplice prediction

auks

Kerberos credential support for batch environments

autocorrection

The autoencoder implementation for the OUTRIDER package

bioccheck

bioconda-recipes

Conda recipes for the bioconda channel.

bioconda-utils

Utilities for building and managing bioconda recipes

biocstickers

Stickers for some Bioconductor packages - feel free to contribute and/or modify.

davidaknowles.github.io

Github Pages homepage

docker_drop

docker_gene_prio

drop

Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders

drop_demo_data

fraser

FRASER - Find RAre Splicing Events in RNA-seq

gcb_ngs_harmonisation_workshop

Materials for NGS Harmonization Workshop at GCB 2023

genogam

genomicalignments

Representation and manipulation of short genomic alignments

ggpval

Add statistical test or annotation to your ggplot2 plots

kipoi

Kipoi's model zoo API

modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

nf-drop-pipeline

outrider

OUTRIDER: OUTlier in Rna-seq fInDER is a R-based framework to find aberrantly expressed genes in RNA-seq samples

rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

rnaseq-ashg19

RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows

rnaseq-methods

spot

SPlicing Outlier deTection

test-ci

Repo to test travis and appveyor pipelines with R packages

testpipeline

A small example pipeline used to test new nf-core infrastructure and common code.

tmae

wbuild

R project report builder