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brentp avatar brentp commented on August 24, 2024

hi @danielecook could you try the latest commit? I explicitly added the numpy
directory to the setup.py includes.

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danielecook avatar danielecook commented on August 24, 2024

@brentp thanks for replying so quickly. Still getting this error.

49 warnings generated.
clang -bundle -undefined dynamic_lookup build/temp.macosx-10.10-x86_64-2.7/cyvcf2/cyvcf2.o cyvcf2/helpers.c cyvcf2/helpers.h -L/usr/local/lib -L/usr/local/opt/openssl/lib -L/usr/local/opt/sqlite/lib -lhts -o build/lib.macosx-10.10-x86_64-2.7/cyvcf2/cyvcf2.so
clang: error: cannot specify -o when generating multiple output files
error: command 'clang' failed with exit status 1

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brentp avatar brentp commented on August 24, 2024

thanks for testing. I pushed one more commit that may resolve this. If not, I'll have to find a mac laptop to test on.

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danielecook avatar danielecook commented on August 24, 2024

That seems to have fixed it! Thanks. Dan

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brentp avatar brentp commented on August 24, 2024

great! let me know if you have any other problems.

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