Comments (2)
Thank you for reaching. I cannot say whether your problem is to do with imcSegmentationPipeline or the ImcDataAnalysis. Could you please check the version of vroom that you have installed, update it in case is ourtdated and try to read the data again?
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Closing due to inactivity
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Related Issues (20)
- Cell segmentation in placental cells. HOT 2
- Error while loading summarizestack HOT 3
- Creating unique .h5 files for Ilastik from ImcSegmentationPipeline Jupyter notebook HOT 2
- Image Stacks Generation - Key Error HOT 19
- Switch use of readimc in pipeline HOT 1
- Error installing conda environment HOT 7
- Pre-processing error HOT 8
- Nd145 not in list error when generating image stacks HOT 5
- Error“Generate image stacks for downstream analyses” HOT 13
- single-cell expression data HOT 1
- Presence of undefined channels during conversion from MCD to ome-TIFF HOT 2
- Numpy float or unsigned integer in TIFF images HOT 3
- Unable to load Ilastik crop pipeline file to CellProfiler HOT 3
- Jupyter-lab did not open Jupyter notebook HOT 5
- TIFF output all black HOT 4
- windows zip file compression type not recognized
- Corrupt MCD file - using .txt instead HOT 4
- Error in 3_measure_mask.cppipe HOT 4
- 1_prepare_ilastik.cppipe pipeline not working HOT 6
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