bmannakee Goto Github PK
Name: Brian Mannakee
Type: User
Bio: PhD candidate in Biostatistics at University of Arizona. R, bioinformatics, data science
Brian Mannakee's Projects
aml31
batcaver
Implements BATCAVE: Bayesian Analysis Tools for Context-Aware Variant Evaluation
bmannakee.github.io
personal site
broom
Convert statistical analysis objects from R into tidy format
caller_paper
Repository for writing up empirical variant caller
diln
This implements the discrete infinite logistic normal, a Bayesian nonparametric topic model that finds correlated topics.
dissertation_proposal
Proposal repository
eval_tracksig
fsdl-text-recognizer-project
Full Stack Deep Learning Bootcamp Project (Public)
git_demo_iplant
Repository for gapminder processing at IPlant
lymphangioma
mapexr
math574m
mstumorsim
Simulate a tumor with realistic clonality and mutation spectrum
nab
The Numenta Anomaly Benchmark
sig_tracker
Tracks Signature evolution
signature_evolution
stat571a
Code for project in Stat 571A
stat571b
Files for stat 571B
talks
tumor_experiment
A package to set up simulation experiments with simulation using the VarSim package from Roche
tumorsim
ua_beamer_slides
University of Arizona themed beamer slides for presentations
vcnumerics
Numerical analysis of the precision-recall surface for depth, prior, and threshold distributions.
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