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arageno

A web-application for running SNPmatch

bl_web

Code for my personal website

cd3.js

ABRC DNA Lab Barcode reader app. Built using Nodejs and Electron

celery_dock

blthree learns how to use celery

connector-x

Fastest library to load data from DB to DataFrames in Rust and Python

coral

Coral, a library and framework for specifying synthetic biology design processes.

databases

Async database support for Python. 🗄

datagraphs

Example Data Analysis and Visualization

dnaencoding

An example of DNA encoding as described by Goldman et al 2013

filemaker

examples of connecting to Filemaker 13 server using python and ODBC as well as Jython and a JDBC driver.

gat

Genomic Association Tester

genbank_grabber

Fetch the sequence for a Genbank accession. Nothing more, nothing less

gffutils

GFF and GTF file manipulation and interconversion

iot-thermostat

kata

monlang

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

pycopy

Advanced fork of MicroPython - a lean and efficient Python implementation for microcontrollers and constrained systems (repo is rebased on upstream). Please star https://github.com/pfalcon/micropython instead.

pylint-airflow

Pylint plugin for static code analysis on Airflow code

rdlgen

SSRS RDL Report Generator

snpmatch

A simple python library to identify the most likely strain given the SNPs for a sample

sqlglot

Python SQL Parser and Transpiler

streamflow

A twitter bot that tweets the current flow rate of the Olentangy River in Columbus OH

synth_schematics

tableau-palette-manager

tairscripts

tdna-web

tdna_primer_design

Command Line tool to generate genotyping primers for Arabidopsis T-DNA lines

tetoolkit

A package for including transposable elements in differential enrichment analysis of sequencing datasets.

useq