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causallib

A Python package for modular causal inference analysis and model evaluations

dpm360

Repository for Disease Progression Modeling workbench 360 - An end-to-end deep learning model training framework in python on OMOP data

fuse-drug

FuseMedML based molecular biochemistry library for drug discovery/repurposing

fuse-med-ml

A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)

gene-benchmark

Benchmark gene representations from different model families

geno4sd

An python omics data toolkit for the analysis across biological scales

histocartography

A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in computational pathology.

multimodal-models-toolkit

r-brics

Revised breaking of retrosynthetically interesting chemical substructures (r-BRICS) – a revised BRICS module based on rdKit that breaks ring structures and carbon chains