biologyguy Goto Github PK

2016-11-09-nih

2017-05-08-nih

biopython

Official git repository for Biopython (converted from CVS)

buddysuite

Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files

dendropy

A Python library for phylogenetic scripting, simulation, data processing and manipulation.

evopix

Pictures evolved

genmodinvasion

How long until genetically modified humans rule the planet?

git-novice

Software Carpentry introduction to Git for novices.

greenhouselogger

indel-seq-gen

Molecular evolution simulation with dependencies and end-point conditioned inference

jcvi

Python utility libraries on genome assembly, annotation and comparative genomics

jlr-oikopleura

Journal of Living Reviews

olmparser

Parse Outlook for Mac emails

partitionfinder

PartitionFinder discovers optimal partitioning schemes for DNA sequences.

phototaxis

Evolving a preference for light

public_scripts

pytattle

Python module for processing crash reports

python-novice-gapminder

Introduction to Python for non-programmers using gapminder data

r-novice-gapminder

Introduction to R for non-programmers using gapminder data.

rd-mcl

Recursive Dynamic Markov clustering

rf-cloning

segmantd

New BAC segmental Duplications

sepp

Ensemble of HMM methods (SEPP, TIPP, UPP)

shell-novice

Software Carpentry introduction to the shell for novices.

sowhat

Program to run the SOWH test (likelihood-based test used to compare tree topologies which are not specified a priori)

swc-data

undergrad-education-conversations

Conversations about teaching computational skills to undergraduates

work_scripts

workshop-template

Template for workshop websites.