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bioforensics Goto Github PK

repos: 18.0 gists: 0.0

Type: Organization

Bio: The National Biodefense Analysis and Countermeasures Center (NBACC) is a one-of-a-kind facility dedicated to defending the nation against biological threats.

Location: Fort Detrick, MD

Blog: https://bnbi.org

bioforensics's Projects

asm_tools icon asm_tools

Assembly utility scripts used to assemble bacterial isolates sequenced on Illumina paired-end sequencers

claspy icon claspy

Cell line authentication with STRs in Python

cmash icon cmash

Fast and accurate set similarity estimation via containment min hash

fontana icon fontana

A working pipeline created to analyze microhaplotypes from forensic samples.

kmer-cnt icon kmer-cnt

Code examples of fast and simple k-mer counters for tutorial purposes

lusstr icon lusstr

Tool to convert ForenSeq sequence strings to various annotation types for downstream analyses

microhapdb icon microhapdb

Portable database of microhaplotype marker and allele frequency data

microhapulator icon microhapulator

Tools for empirical microhaplotype calling, forensic interpretation, and simulation.

prokka icon prokka

:zap: :aquarius: Rapid prokaryotic genome annotation

rsidx icon rsidx

Library for indexing VCF files for random access searches by rsID

yeat icon yeat

YEAT: Your Everyday Assembly Tool

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