Related Issues (20)
- qreduceAssay: simplifyReduce HOT 1
- Add real data vignette and data object HOT 2
- Update vignette with new arguments
- Ragged experiment from a sliced multi-assay experiment contains unexpected columns HOT 5
- remove RangedRaggedAssay coercion HOT 1
- Error in as(background, class(mcol)) : no method or default for coercing “logical” to “factor” HOT 5
- Return GRanges for *Assay method HOT 3
- Error in rowData annotation (that also affects colData) HOT 3
- Disentangling assays and rowData HOT 8
- qreduceSummarizedExperiment vs qreduceAssay argument names HOT 3
- qreduceAssay: inconsistency in simplifyReduce HOT 3
- Error in colnames<- HOT 4
- Error in assay<- / assays<- HOT 2
- no method or default for coercing “SimpleGRangesList” to “CompressedGRangesList” HOT 9
- High memory usage when using assay() on large RaggedExperiments HOT 3
- assays usage and constructor HOT 10
- dimnames(x) <- value was not working as expected for RaggedExperiment HOT 4
- Different order of rows depending on the type of assay extraction HOT 2
- rowRanges with extra columns HOT 1
- summarization of individual calls/ranges across population HOT 12
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from raggedexperiment.