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bio-nim's Projects

c2nim icon c2nim

c2nim is a tool to translate Ansi C code to Nim. The output is human-readable Nim code that is meant to be tweaked by hand before and after the translation process.

cligen icon cligen

Nim library to infer and generate command-line-interfaces

daligner icon daligner

Find all significant local alignments between reads

hts-nim icon hts-nim

nim wrapper for htslib for parsing genomics data files

htslib icon htslib

C library for high-throughput sequencing data formats

levenshtein icon levenshtein

Faster alternative to editDistance in Nim's standard library

msgpack4nim icon msgpack4nim

MessagePack serializer/deserializer implementation for Nim / msgpack.org[Nim]

networkx icon networkx

Official NetworkX source code repository.

nim icon nim

Nim is a compiled, garbage-collected systems programming language with a design that focuses on efficiency, expressiveness, and elegance (in the order of priority).

nim-daligner icon nim-daligner

Nim wrapper/translations of PacBio DALIGNER fork -- See https://github.com/PacificBiosciences/DALIGNER

nim-edlib icon nim-edlib

Nim wrapper for edlib (Martin ล oลกiฤ‡)

nim-falcon icon nim-falcon

Nim versions of FALCON executables -- See https://github.com/PacificBiosciences/FALCON

nim-heap icon nim-heap

Simple binary heap implementation in Nim

nim-kmers icon nim-kmers

Library for bioinformatics (kmers, etc.) written in Nim

nim-networkx icon nim-networkx

[WIP] Nim port of (a subset of) the pure-Python networkx library

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