bergeycm Goto Github PK
Name: Christina Bergey
Type: User
Bio: Assistant Prof at Rutgers, studying genomics of people, primates, and disease vectors.
Twitter: bergeycm
Location: New Brunswick, New Jersey
Name: Christina Bergey
Type: User
Bio: Assistant Prof at Rutgers, studying genomics of people, primates, and disease vectors.
Twitter: bergeycm
Location: New Brunswick, New Jersey
Scripts to analyze population structure of Anopheles gambiae mosquitoes in Lake Victoria basin.
Code used for analyses in Bergey et al 2016, "Dopamine pathway is highly diverged in primate species that differ markedly in social behavior"
Automate the discovery of exact short tandem repeats (and its flanking region) from Illumina fastq sequences.
A powerful toolset for genome arithmetic.
Home for random bioinformatic scripts.
Given the refGene.txt database file (in ANNOVAR format), this R script outputs a BED file of the 1st, 2nd, or 3rd codons.
Links and resources for getting started with bioinformatics
A list of things to bring when undertaking biological fieldwork
Updated Kraken DB install scripts to cope with new-ish NCBI structure
A general pipeline for mapping next-gen sequencing reads and calling variants
Code used in the development of the "fecalseq" method for enriching host DNA from feces
Code used for "Polygenic adaptation and convergent evolution across both growth and cardiac genetic pathways in African and Asian rainforest hunter-gatherers"
Code for RNAseq workshop run in July 2017
Stuff I Routinely Forget How to Do
Code used in the analysis of tapeworm genomes.
Analysis pipeline for cross species exome next-generation sequencing data
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.