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petrux avatar petrux commented on June 17, 2024

Update.

Playing a bit with the code, I noticed that the distance produced by edit_distance(a, b) is a tuple of two elements, where the first is equal to the distance produced by edit_distance_backpointer(a, b). HTH.

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petrux avatar petrux commented on June 17, 2024

Update/2.

Going on analyzing my data, I found this interesting example.
In this case:

  • the edit_distance function returns a tuple which is (17, 12);
  • the edit_distance_backpointer function returns a distance value which is 16.
    Here follows the dump of (almost) everything:
a = ['that', 'continuous', 'sanction', ':=', '(', 'flee', 'U', 'complain', ')', 'E', 'attendance', 'eye', '^', 'flowery', 'revelation', '^', 'ridiculous', 'destination', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>']
b = ['continuous', ':=', '(', 'sanction', '^', 'flee', '^', 'attendance', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>', '<EOS>']
edit_distance(a, b) -> (17, 12)
edit_distance_backpointer(a, b) -> 16

delete    T[0:1] -> P[0:0] ['that'] -> []
equal     T[1:2] -> P[0:1] ['continuous'] -> ['continuous']
delete    T[2:3] -> P[0:0] ['sanction'] -> []
equal     T[3:4] -> P[1:2] [':='] -> [':=']
equal     T[4:5] -> P[2:3] ['('] -> ['(']
insert    T[4:4] -> P[3:4] [] -> ['sanction']
insert    T[4:4] -> P[4:5] [] -> ['^']
equal     T[5:6] -> P[5:6] ['flee'] -> ['flee']
replace   T[6:7] -> P[6:7] ['U'] -> ['^']
replace   T[7:8] -> P[7:8] ['complain'] -> ['attendance']
replace   T[8:9] -> P[8:9] [')'] -> ['<EOS>']
replace   T[9:10] -> P[9:10] ['E'] -> ['<EOS>']
replace   T[10:11] -> P[10:11] ['attendance'] -> ['<EOS>']
replace   T[11:12] -> P[11:12] ['eye'] -> ['<EOS>']
replace   T[12:13] -> P[12:13] ['^'] -> ['<EOS>']
replace   T[13:14] -> P[13:14] ['flowery'] -> ['<EOS>']
replace   T[14:15] -> P[14:15] ['revelation'] -> ['<EOS>']
replace   T[15:16] -> P[15:16] ['^'] -> ['<EOS>']
replace   T[16:17] -> P[16:17] ['ridiculous'] -> ['<EOS>']
replace   T[17:18] -> P[17:18] ['destination'] -> ['<EOS>']
equal     T[18:19] -> P[18:19] ['<EOS>'] -> ['<EOS>']
equal     T[19:20] -> P[19:20] ['<EOS>'] -> ['<EOS>']
equal     T[20:21] -> P[20:21] ['<EOS>'] -> ['<EOS>']
equal     T[21:22] -> P[21:22] ['<EOS>'] -> ['<EOS>']
equal     T[22:23] -> P[22:23] ['<EOS>'] -> ['<EOS>']
equal     T[23:24] -> P[23:24] ['<EOS>'] -> ['<EOS>']
equal     T[24:25] -> P[24:25] ['<EOS>'] -> ['<EOS>']
equal     T[25:26] -> P[25:26] ['<EOS>'] -> ['<EOS>']
equal     T[26:27] -> P[26:27] ['<EOS>'] -> ['<EOS>']
equal     T[27:28] -> P[27:28] ['<EOS>'] -> ['<EOS>']
equal     T[28:29] -> P[28:29] ['<EOS>'] -> ['<EOS>']

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petrux avatar petrux commented on June 17, 2024

Update/3.

Flipping the two sequences, everything goes fine.

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belambert avatar belambert commented on June 17, 2024

Yup, your data looks really weird:). I am able to reproduce the problem and am looking into it.

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belambert avatar belambert commented on June 17, 2024

Hi @petrux - I think I found the problem and fixed. Would you be able to try it out and confirm that you don't get the error anymore? Thanks very much for pointing this out too.

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petrux avatar petrux commented on June 17, 2024

Sure. Shall I reinstall from pip or checkout the code?

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belambert avatar belambert commented on June 17, 2024

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petrux avatar petrux commented on June 17, 2024

Checked right now installing via pip on a python3.5 virtual environment. The behavior looks coherent: in all cases I have the tuple (16, 15) as a result. Just to ask -- since I am not very familiar with the theoretical foundations of the edit distance -- why a tuple of values? Thanks!

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belambert avatar belambert commented on June 17, 2024

Sorry, it's probably not clear anywhere. The first value is the edit distance, the second value is the number of matches. The number of matches can be useful to know too.

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petrux avatar petrux commented on June 17, 2024

Cool, thanks for the explanation!

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