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Clonotype Neighbor Graph Analysis
Demultiplexing cell/nucleus hashing data for single-cell genomics
Official code repository for GATK versions 4 and up
GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only
High dimensional weighted gene co-expression network analysis
A Java API for high-throughput sequencing data (HTS) formats.
A modern genome browser built with JavaScript and HTML5.
Monorepo with JBrowse 2 web, JBrowse 2 desktop, the JB core package, core plugins, and more.
JBrowse 2 plugin for integrating with GDC resources
JavaScript client API for LabKey Server
IMGT segment library converted to RepSeq.IO JSON format
MiXCR is a universal software for fast and accurate analysis of T- and B- cell receptor repertoire sequencing data.
LabKey Server modules used by the Oregon National Primate Research Center for their primate EHR and other functionality
pegasus io module for reading/writing single-cell genomics data
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
A set of modules that provide core functionality for LabKey Server
Install R packages from GitHub, GitLab, Bitbucket, git, svn repositories, URLs
RNA-SeQC v1 — Please upgrade to v2: https://github.com/broadinstitute/rnaseqc
A dummy repo to for R CMD check exit code
marker-based purification of cell types from single-cell RNA-seq datasets
Quantifying metabolism activity at the single-cell resolution
Top-level classes and configuration files for LabKey Server.
R toolkit for single cell genomics
Dataset distribution for Seurat
Interfaces for HDF5-based Single Cell File Formats
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.