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Bence Bagi's Projects

cookiecutter-neural-data icon cookiecutter-neural-data

A barebones template for neural data analysis. Stripped down from (http://drivendata.github.io/cookiecutter-data-science/) by Alex Williams, adapted to my needs by me.

ds-hdp-hmm icon ds-hdp-hmm

Disentangled Sticky Hierarchical Dirichlet Process Hidden Markov Model

hidenseek_hmm icon hidenseek_hmm

Unsupervised discovery of behaviorally relevant brain states in rats playing hide-and-seek

kokisharpwaves icon kokisharpwaves

Modeling the network dynamics underlying hippocampal sharp waves and sequence replay.

mesopopdyn_gif icon mesopopdyn_gif

Mesoscopic dynamics of interacting populations of GIF/GLM spiking neurons

nelpy icon nelpy

Neuroelectrophysiology object model and data analysis in Python.

nemos icon nemos

NEural MOdelS, a statistical modeling framework for neuroscience.

pyaldata icon pyaldata

Repository for the Python implementation of the TrialData analysis library.

scipy icon scipy

Scipy library main repository

spikeinterface icon spikeinterface

A Python-based module for creating flexible and robust spike sorting pipelines.

ssm icon ssm

Bayesian learning and inference for state space models

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