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  • šŸ‘‹ Hi, Iā€™m @atulkakrana
  • šŸ‘€ Iā€™m interested in precision medicine, RWE, and applying computer science for improving human health
  • šŸ’žļø I would love to collaborate for technologies that helps improve human health or health outcomes
  • šŸ“« You can reach me at [email protected]

Atul Kakrana's Projects

atulkakrana.github.io icon atulkakrana.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

clinicalbert icon clinicalbert

ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission

data-analytics icon data-analytics

Machine Learning (Sci-Kit Learn), High-Performance Computing (Spark), Natural Language Processing (NLTK) and Cloud Computing (AWS)

ganbert icon ganbert

Enhancing the BERT training with Semi-supervised Generative Adversarial Networks

matchannot icon matchannot

Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.

phasis icon phasis

Suite for phased clusters discovery, comparison, annotation and to identify miRNA triggers - uses MapReduce model [In review]

preprocess.seq icon preprocess.seq

Parallelized pipeline for pre-processing (Illumina) and quality assessment of sequencing libraries [Published]

sparta icon sparta

miRNA-target prediction and PARE-seq based validation tool - uses MapReduce model [Published]

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