Name: Arun Seetharam
Type: User
Company: Iowa State University
Twitter: ArunSeetharam
Location: Ames, IA
Blog: https://seetharam.info
š Iām currently working on:
š± Iām currently learning Python, Rust
šØāš» All of my projects are available at seetharam.info/
š I regularly write articles on seetharam.info/posts/
š¬ Ask me about genome assemblies, annotations, RNAseq/snRNAseq/scRNAseq or anything bioinformatics!
š« How to reach me [email protected]
š Know about my experiences My CV
Ā
2013-davis-assembly
2018_scworkshop
3d-dna
3D de novo assembly (3D DNA) pipeline
academic-kickstart
alembic-kit
aravind-website
Repository for my website
aseetharam
profile
aseetharam.github.io
My personal webpage
assemblage
Tools for working with second gen assemblies, fasta sequences, etc
augustus
Genome annotation with AUGUSTUS
awk_data_manipulation
using AWK to do some routine data manipulation
bagels
open source bagel recipe; let's raise the quality of bagels worldwide :bagel: :rocket:
bash_config
All my bash configurations to sync arcoss all HPC
bind_annotation
Scripts, notes and documents about the BIND annotation workflow (BIND: ab initio gene predictions by BRAKER combined with gene predictions INferred Directly from alignment of RNA-Seq evidence to the genome.)
bio-playground
miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.
bioawk
BWK awk modified for biological data
biocode
Bioinformatics code libraries and scripts
bioinformatics
Syllabus and materials for bioinformatics lecture + lab
bioinformatics-training
Bioinformatics training resources
braker
braker container
class2
clustermonitor
Very simple script which logs the CPU and RAM usage of the submitted job.
common_scripts
my bin directory
containers
data-science-ipython-notebooks
Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.
data_hacks
Command line utilities for data analysis
edta
fasta_utilities
A collection of scripts developed to interact with fasta, fastq and sam/bam files.
fastq-tools
Small utilities for working with fastq sequence files.
free-programming-books
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
š Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ššš
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ā¤ļø Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
