ameynert Goto Github PK
Name: Alison Meynert
Type: User
Name: Alison Meynert
Type: User
4-8 April 2022 Sanger Data Carpentry (Genomics) Workshop
Nextflow pipeline for conversion of BAM to FASTQ
Download FASTQ files from Illumina BaseSpace via the CLI with checksums
Config files used to define parameters specific to compute environments at different Institutions
DNA alignment pipeline tailored to IGMM compute cluster
The Ensembl Core Perl API and SQL schema
A multilingual glossary package.
Good Enough Practices in Scientific Computing
Nextflow pipeline to merge FastQ files from different lanes
Repository to host tool-specific module files for the Nextflow DSL2 community!
Aggregate results from bioinformatics analyses across many samples into a single report.
Nanopore demultiplexing, QC and alignment pipeline
Nextflow pipeline for running arcasHLA on eddie
Code and files for the main nf-core website.
Nextflow implementation of Indelible SV calling pipeline
A Nextflow workflow to generate lift over files for any pair of genomes
RNA sequencing analysis pipeline using STAR, HISAT2 and Salmon with gene counts and quality control
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
A single-cell RNAseq pipeline for 10X genomics data
Slides for sharing publicly
Introduction to Snakemake for Bioinformatics
fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs
UNDER CONSTRUCTION: Assembly and intrahost/low-frequency variant calling for viral samples
Data Wrangling and Processing for Genomics
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.