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Alexander Ramos's Projects

all_notebooks icon all_notebooks

Here you can find various (Jupyter) notebooks and bioinformatics scripts (mostly Linux shell) organized in folders depending on the topic or source

createtaxdb icon createtaxdb

Parallelised and automated construction of metagenomic classifier databases of different tools

dashboards icon dashboards

Dahsboards on various topics written in R and Python.

hclust_mix icon hclust_mix

hclust_mix is a Python script that allows the identification of attractor states from gene expression matrices using Hopfield neural networks.

mag icon mag

Assembly and binning of metagenomes

modules icon modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

nf-co.re icon nf-co.re

Code and files for the main nf-core website.

test-datasets icon test-datasets

Test data to be used for automated testing with the nf-core pipelines

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