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365pyandc

Goal is to solve 1 datastruct/algo problem every day for a year, both in C and in Python3.

autoblast

A set of Python and Bash scripts for automated BLAST analysis of the flanking sequences of circular RNAs.

basics

BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/packages/BASiCS/ for the official release version

circrcm_knockout

Script that produces BED files of RCMs

ewce

Expression Weighted Celltype Enrichment

forking

gramaticiindependentedecontext

gwascelltyper

hdl_consultant_challenge

intronpicker

CircRNAs are a novel form of non-coding RNAs with growing attention from the scientific community. This tool is a simple script that automates picking introns flanking the circRNAs for potential binding and conservation analysis purposes.

junction-fasta-maker

Takes BED file of circRNA splice sites and creates a FASTA file of their junctions (chrI 1 5 b 0 + to ccta to TAcc)

magma_celltyping-1

Identify cell types underlying the associations found in GWAS summary statistics

ml_courses

mlcounter

A processing image generator with random circles inside and a machine-learning counter

singler

SingleR: Single-cell RNA-seq cell types Recognition