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cell_bank_test

cummerbund-pipeline

Differential Analysis of RNAseq data processed by Cufflinks using Cummerbund pipeline

electrostatic_energy_function

Energy function that calculates the electrostatic energy between amino acids and nucleic acids in a PDB

homology_modeling_project

Generate Homology Models of Transcription Factor- DNA structures using a Transcription factor FASTA sequence

integrated_energy_function

Generates every permutation of a DNA sequence in protein-DNAPDB structure and initiates the energy functions for each permutation

new_electrostatic_energy_function

Calculates electrostatic energy between amino acids and nucleic acids in a pdb structure

pentamer_algorithm

phlat_work

A few scripts for PHLAT analysis

rna_seq_analysis_shiny_app

RNAseq differential Expression Analysis tool

rogue

RNAseq & Ontology Graphic User Environment

test-docker