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Amare Wolide's Projects

bismark icon bismark

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

bsbolt icon bsbolt

BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool

cfdnapipe icon cfdnapipe

cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data

depmap_omics icon depmap_omics

What you need to process the Quarterly DepMap-Omics releases from Terra

liana icon liana

LIANA: a LIgand-receptor ANalysis frAmework

light-adjusting-wallpaper-changer-lawc- icon light-adjusting-wallpaper-changer-lawc-

This is a Wallpaper Changer tool which will allow you to show them by random or by least viewed, but it will also adjust the images for a Day / Night cycle which can be set to any time you want. LAWC stores the library of pictures catalogued from user selected folders, and will select wallpapers from those images. It also supports multi-monitors.

maftools icon maftools

Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

nextflow icon nextflow

A DSL for data-driven computational pipelines

nichenetr icon nichenetr

NicheNet: predict active ligand-target links between interacting cells

scplc icon scplc

Codes for the scPLC project

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