aarthi31 Goto Github PK

aarthi31.github.io

Aarthi Ravikrishnan's website

balance

An R package to visualize balances of compositional data without dendrograms

beem

BEEM: Estimating Lotka-Volterra models from time-course microbiome sequencing data

beem-static

BEEM-static: An R package for inferring microbial interactions based on Lotka-Volterra models

bioconda-recipes

Conda recipes for the bioconda channel.

bioconvert

Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.

biolearn

Machine learning tools for biomarker analysis

bubblecv

This is a professional CV template inspired by the legendary secret agent James Bond. BubbleCV is designed to effectively showcase your skills, work experience, education, and contact information in a sleek and impactful manner.

caret

caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models

carveme

CarveMe: genome-scale metabolic model reconstruction

chenlab-training

cobratoolbox

COnstraint-Based Reconstruction and Analysis toolbox

codainpractice

Compositional Data Analysis in Practice

codebase

Code depository for papers

cruk-summer-school-2017

Analysis of Cancer Genomes; 2017 edition

curated-bifidobacterial-gsm

Deciphering the metabolic capabilities of Bifidobacteria using genome-scale metabolic models

drugs_bioaccumulation

ds_lab

famas

Yet another fastq massaging program

fiber-fermented-study

folder-structure-conventions

Folder / directory structure options and naming conventions for software projects

friendsdontletfriends

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

gitignore

A collection of useful .gitignore templates

gneiss

compositional data analysis toolbox

groningen-microbiome

Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groningen

gutmicrobiome

Contains all the codes and the files required to generate the images in the paper titled "Unraveling microbial interactions in the gut microbiome"

helius

hello_world

hipster-cv

Repo to share the template for the Hipster-CV

hospital_microbiome