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Name: Peter Hickey
Type: User
Blog: www.peterhickey.org
Name: Peter Hickey
Type: User
Blog: www.peterhickey.org
Material for presentation on using continuous integration services (e.g., Travis) when developing Bioconductor packages given on 2015-09-08 in Tokyo, Japan as part of the Asia-Pacific Bioconductor Developers' Meeting.
Material for lightning talk given on 2015-09-08 in Tokyo, Japan as part of the Asia-Pacific Bioconductor Developers' Meeting.
Material for presentation on analysing DNA methylation data with Bioconductor at GIW/InCoB 2015 given on 2015-09-09 in Tokyo, Japan
Material for presentation on zero inflated Poisson regression at Biostatistics Journal Club given on 2016-03-01
This repository is merely a copy of the `Aclust` R package developed by Tamar Sofer. This version of `Aclust` was downloaded on 30 April, 2014 from [http://www.hsph.harvard.edu/tamar-sofer/packages/](http://www.hsph.harvard.edu/tamar-sofer/packages/).
Create QC and summary reports for Alevin output
Analysis of transposable elements
Benchmarking the DelayedMatrixStats package
This repository contains code related to the publication "Comparative performance of the BGI and Illumina sequencing technology for single-cell RNA-sequencing" by Senabouth et al.
package for 'Management and analysis of large genomic data' lab
Proposed tutorial on the DelayedArray infrastructure for BioC 2018
Workshop on the DelayedArray infrastructure for BioC 2019
BioC2020: Where Software and Biology Connect
Workshop on effectively using the DelayedArray framework to support the analysis of large datasets
About Workshop on effectively using the DelayedArray framework to support the analysis of large datasets
Presentation given at Bioconductor Developers' Meeting (26-28th, July, 2017, Boston, USA)
Presentation given at European Bioconductor Developers' Meeting (12th-13th January 2015, Heidelberg, Germany)
Bioconductor teaching working group
Workshops for learning Bioconductor
An introduction to bioimage analysis - http://bioimagebook.github.io
Branch of bismark (v0.8.1) to implement some of my ideas regarding FLAG values in SAM/BAM files
Devel repository for bsseq
An experimental hack of bwa-meth to align PAR-CLIP reads
An R package with tools for analysing, managing and visualising co-methylation data. Loosely speaking, co-methylation is the correlation structure of DNA methylation.
A Python script to "correct" the FLAGs in a SAM/BAM generated by Bismark to comply with the SAM specifications. Specifically, correct the strand information in the FLAG and add a custom tag XS:Z:<value> to encode which DNA-strand the read is informative for, where <value> = OT, CTOT, OB or CTOB.
A (simplistic) Perl script to create a VCF file from a dbSNP flat database.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.