littlefroghill Goto Github PK
Name: GaoShan
Type: User
Bio: RNA-seq，DEGs，Alternative splicing，genome assembly
GaoShan's Projects
ase
Pipeline of analysing ASE genes of hybrid animals
dbg2olc
The genome assembler that reduces the computational time of human genome assembly from 400,000 CPU hours to 2,000 CPU hours, utilizing long erroneous 3GS sequencing reads and short accurate NGS sequencing reads.
mites-assembly
Ppr, Nps, Hga
protist
Kenny Data
pythonnotes
记录一些语法 难题等
rnaseq_tutorial
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
script
All scripts for python/R/shell
suppdata_metazoa_2017
Alignments, supermatrices and trees from Simion & Philippe et al. 2017
umi_tools-analysis
analysis teh reads with barcode
zumis
zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
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