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detect_rare_peaks

Find rare peaks in picked or unpicked data sets using a histogram grouping and filtering method.

grine-v2

New implementation of Grine

grine_demo

Pre-configurated version of Grine to reproduce the results for the following publication:

imaging_communitydetection_demo

Pre-configurated pipeline to find communities within a network build from lateral imaging data to reproduce the results of the following publication:

imzml-to-hdf5

Small parser to convert a imzML file into an HDF5 file.

matrix_aligner

Calculate some standard alignment algorithms and write a LaTeX file containing the results.

msi-community-detection

Package to detect communities in image networks build from mass spectrometry imaging data.

music_renamer

Helpful script to rename some music with ID3 informations

provim

ProViM is a preprocessing pipeline for Mass Spectrometry Imaging (MSI) data.

roi-prediction

sorc

Similarity / Distance measure evaluation procedure for MSI mass channel data.

sorc-paper-data

Example mass channel image data used in publication:

vaidra

Visual Analysis Tool for the Interactive Exploration of Multivariate Imaging Data Dimension Reduction Embeddings and Embedding based Annotation.

whide-v2

New implementation of Whide.