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Name: Xian
Type: User
Name: Xian
Type: User
Cytometry by time-of-flight(CyTOF) data is very useful in studying the presence/absence of antigens/surface markers at single cell level. There are multiple tools to analyze CyTOF data but here I am presenting a tutorial of how one can quickly use Seurat (R package for scRNA-Seq analysis) for analyzing CyTOF data and understand the cellular and phenotypic diversity
Integrated pipeline for multiplexed image analysis
List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Package for analysis and experimental design of multiplexed imaging data
bead-based normalization of mass cytometry data
《R语言数据可视化之美》配套代码
An Analytical Framework for Big-Scale Single Cell Data
Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and CyTOF data
Cytometry analysis pipeline for large and complex datasets (CAPX) (beta)
Cytometry dATa anALYsis Tools
Representation Learning for detection of phenotype-associated cell subsets
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
Matlab code for cell segmentation of multiplexed imaging data
Computational Immune Synapse Analysis
Citrus Development Code
GPU-accelerated image processing for everyone
A gui for running different K-Means clustering techniques on benchmark datasets
An ultra-fast similarity measurement and clustering algorithm. It precisely measures similarity between datasets with any number of dimensions and observations with no need for dimension reduction or downsampling.
A visual exploratory tool on correlation matrix
Modified Itcn plugin for ImageJ
Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researchers from wet and dry lab to perform downstream Bioinformatics analysis
How to make those 3D data visualizations
A Systematic Comparison of Differential Analysis Methods for CyTOF Data & CYANUS App
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.