Shan Shen's Projects
Canonical Colony-Management pipeline developed under the U24
Canonical Lab-Management pipeline developed under the U24
DataJoint modules for reference information
Data Pipeline for paper Chen, 2017
Example schema for mouse colony management
DataJoint schemas for neuroscience data
xiaolong's connectivity data
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
Datajoint pipelines and code for the Churchland lab.
Developing tool to build a Plotly Dash app for a DataJoint pipeline
Documentation https://docs.datajoint.io
DataJoint Elements is a collection of curated computational workflow for neurophysiology experiments.
Datajoint pipelines and code for the Hillman lab.
A frontend with graphical user interface for DataJoint pipelines built using React.
High-level relational database interface for MATLAB
A project showcasing published datasets with matching DataJoint pipelines and NWB 2.0 export
PacMan Task DataJoint pipeline
A series of notebooks accompanying video tutorials
build a data pipeline in datajoint python
Datajoint Implementation of the Alyx schema (https://github.com/cortex-lab/alyx)
DataJoint Element for Animal Management - NIH U24
DataJoint Element for Lab Management - NIH U24
DataJoint Element for Miniscope Imaging - NIH U24
DataJoint Element for Optogenetics Experiments.
DataJoint Elements for Calcium Imaging - U24 effort
Code to extract electrophysiological parameters of neurons.
Code to replicate figures for the feedback paper