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Name: Applied Bioinformatics Laboratories
Type: Organization
Location: New York, NY
Name: Applied Bioinformatics Laboratories
Type: Organization
Location: New York, NY
Scripts for .bed file genomic region annotation with various tools
Automatic analysis pipline & reporting template
how to set up Anaconda and Conda environments on NYULMC phoenix HPC cluster
Docker and Singularity containers for Bioinformatics programs
Dockerfile to build a container with SGE installed
A demo for converting Docker images to Singularity images.
Gene content in n-grams, lateral gene transfer detection
A set of pipelines for Hi-C and ChIP-Seq analysis.
Demo dataset & usage for HiC-Bench ChIP-Seq pipeline
User manuals for the HiC-Bench software
Script to automatically create and run IGV snapshot batchscripts
lncRNA-screen
Call somatic mutations and call Class 1 and 2 epitopes
Boilerplate code for Nextflow pipelines
Example Nextflow pipelines and programming techniques
Nextflow basic Bioinformatics workflow for testing and demonstration
ChIPSeeker genomic region summary plotting and annotation script
A quick report to make a plot & table of the number of peaks per BED file in a dir
Makefile for reference annotations for hg19 genes & genomic regions
Singularity container for samtools
illumina sequencing data analysis pipelines
How to download TCGA data from GDC portal
Script to automatically generate custom tracks to load on UCSC
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.