ningshuang-yao Goto Github PK
Name: Gang Yao
Type: User
Bio: Institute of Botany, CAS
Name: Gang Yao
Type: User
Bio: Institute of Botany, CAS
**DEFUNCT** dada2-based Nextflow pipeline for multiple amplicon data. See website for up-to-date version
This repository contains an older version of our 16S rDNA diversity analysis pipeline. It uses a combination of bash scripts. To get a more updated version of the pipeline using Nextflow please go here: https://github.com/h3abionet/h3abionet16S/tree/master/workflows-nxf
Inferring phylogenetic networks from trees
Adaptive introgression during environmental change can weaken reproductive isolation
adegenet: a R package for the multivariate analysis of genetic markers
An R package for reproducible and automated ADMIXTOOLS analyses
Tools test whether admixture occurred and more
Working space for the GIAB TR benchmarking project
A snakemake based pipeline to build Adotto TR databases
Algorithm For Gene Order Reconstruction in Ancestors
agoTRIBE 在单细胞中检测整个转录组的 microRNA-目标相互作用
High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.
A pipeline for allele identification and allele-specific gene expression
Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
This pipeline is used to distinguish allotetraploid subgenomes.
Accurately predict which mutations in proteins are likely to cause health conditions
Codes for Ancestor reconstruction of monocotyledonous plants
Heterosis in Arabidopsis thaliana
Ancestry_HMM-S is program designed to infer adaptive introgression from population genomic data
sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism and whole-genome duplication variation
Cantù Lab @ UC Davis - Annotation pipeline - EVM based
Annotation and Ranking of Structural Variation
antiSMASH
Detecting archaic introgression sequences and reconstructing introgression history.
A tool for analysis of assembly graphs(GFA format)
Get assembly statistics from FASTA and FASTQ files
Code for identifying differences between assemblies
Improve the quality of a denovo assembly by scaffolding and gap filling
DEG&WGCAN analysis
Tool to detect ATHILA LTR retrotransposons in plant genomes
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.