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awesome-r

A curated list of awesome R packages, frameworks and software.

csv.swift

CSV reading and writing library written in Swift.

ecoevolinks

Links for Ecology and Evolution

es-sim

A simple, simulation-based test for links between diversification rates and continuous traits.

evopro

f1000_workflow

fastchat

An open platform for training, serving, and evaluating large language models. Release repo for Vicuna and Chatbot Arena.

geneticalgorithmpython

Genetic Algorithm Implementation in Python using NumPy

hashmap

Faster hash maps in R

homebrew-bamm

Homebrew formula for BAMM

knn

Weighted k Nearest Neighbor algorithm

latex2sympy

Parse LaTeX math expressions

legesher

Because language shouldn't be a barrier to code

legesher-translations

Home of all the translations for spoken languages into programming language

metagmisc

Miscellaneous functions for metagenomic analysis.

neuralgenetic

Optimizing artificial neural network parameters using the genetic algorithm for the classification of the Fruits360 dataset. The implementation is from scratch using NumPy.

packagebackups

plantminer

Match lists of taxa against the Brazilian Flora Checklist and The Plant List

posts

A repository of pieces of code that have appeared on my blog with a focus stochastic simulations.

s.phylomaker

This repository contains the R codes and relevant data for performing the S.PhyloMaker function.

seed

R/Shiny application for viewing microbial community data

seed_size

R code for the manuscript "Seed size and its rate of evolution correlate with species diversification across angiosperms"

taxa

taxonomic classes for R

terminal-velocity

Phylogenetic Analysis of TRY Seed Terminal Velocity Data

vegdesk

R Shiny App for Vegetation Description and Analysis