bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

cfdna

Analysis of epigenetic signals captured by fragmentation patterns of cell-free DNA

cfdna-1

cfDNA analysis workflow

cfdna-5mc

a shared pipeline for cell-free DNA-Methylation data (sequencing+array) analysis

cfdna-ngs-analysis

cfDNA NGS analysis pipeline/scripts developed in lulab

cfea-pipeline

source code for our CFEA pipeline

cfpeak

fragment-scale peak calling for cfRNA analysis

computer-science

:mortar_board: Path to a free self-taught education in Computer Science!

cov_trs_structure

deepcat

Deep Learning Method to Identify Cancer Associated TCRs

deepcat-pipe

lulab TCR pipeline using available tools

dsrfinder

exvariance

gittest

hello-world

hunnngry

webtest

ismart

Highly specific clustering of T cell receptor CDR3s

jupyter

Jupyter metapackage for installation, docs and chat

lulab

PI: Luzhi in tsinghua

markdown-here

Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

medips

MEDIPS - MEthylated DNA ImmunoPrecipitation Sequencing analysis

medips1.0.0

MEDIPS v1.0.0

medips1.42

GITHUB version of bioconductor source code

methy_array

ncrnalab

rsamtools

Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

teaching_book

teachyourselfcs-cn

TeachYourselfCS 的中文翻译 | A Chinese translation of TeachYourselfCS

testbook

testgit