Famke Bäuerle's Projects
ABlog for blogging with Sphinx
Conda recipes for the bioconda channel.
CarveMe: genome-scale metabolic model reconstruction
Own Mirror of the Carveme Repo with Gurobi as solver.
Example of building Sphinx docs to GitHub Pages
Config files for my GitHub profile.
Genome-scale metabolic model of Neocallimastix lanati
Repository to host tool-specific module files for the Nextflow DSL2 community!
A python library and command-line client for file storage on OSF
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Test data to be used for automated testing with the nf-core pipelines
Collection of .tex files
Python package with helper tools for the nf-core community.
A nextflow variant benchmarking pipeline - premature